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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4273946 chr9:100547627 G/C NKX6-1 chr4:85413140-85419603:- 0.5 8.76 3.34E-17 Box Plot
THCA rs4273946 chr9:100547627 G/C PLCE1 chr10:95790569-96092580:+ 0.27 6.3 6.91E-10 Box Plot
THCA rs4274988 chr5:45926441 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.88 2.23E-14 Box Plot
THCA rs4274990 chr5:46080887 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -8.17 2.79E-15 Box Plot
THCA rs4276421 chr5:45802079 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -8.13 3.61E-15 Box Plot
THCA rs4277924 chr5:46089444 G/T LOC647121 chr1:121260910-121313686:+ -0.35 -7.59 1.68E-13 Box Plot
THCA rs4282324 chr5:45865432 T/C LOC647121 chr1:121260910-121313686:+ 0.36 7.72 6.67E-14 Box Plot
THCA rs4284478 chr12:88907563 A/G ATP6V1B1 chr2:71163012-71192536:+ -0.42 -5.97 4.56E-9 Box Plot
THCA rs4286846 chr7:33054812 C/G FKBP9L chr7:55748767-55780945:- 0.36 7.4 6.18E-13 Box Plot
THCA rs4289566 chr5:45955601 G/A LOC647121 chr1:121260910-121313686:+ 0.37 7.78 4.41E-14 Box Plot
THCA rs4291231 chr8:10990164 G/A SGK223 chr8:8175258-8244008:- 0.4 7.26 1.6E-12 Box Plot
THCA rs4292455 chr5:46091267 G/A LOC647121 chr1:121260910-121313686:+ -0.38 -8.16 3.0E-15 Box Plot
THCA rs429352 chr11:49203613 C/A FOLH1B chr11:89372395-89431886:+ 0.49 8.02 7.99E-15 Box Plot
THCA rs4295054 chr2:132191165 C/T CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs4295734 chr9:141064741 G/T TUBB4Q chr4:190903679-190906024:- 0.74 14.03 1.1E-37 Box Plot